These small datasets are used in the Mandala public vignettes. They are provided so that readers can reproduce the examples without access to the private development repository.
| File | Records | Description |
|---|---|---|
fullrep_MET_n1000.csv |
1000 | Full-replicated multi-environment trial example with genotype, environment, replication, row-column layout, and trait columns. |
sparse_prep_MET_n1000.csv |
1000 | Sparse/partially replicated multi-environment trial example with incomplete genotype sharing across environments and row-column layout. |
augmented_single_n200.csv |
200 | Single-site augmented/spatial field-trial example with row-column layout and trait columns. |
sim_GRM_1000.rds |
1000 x 1000 | Genomic relationship matrix for the public example genotype set. |
df <- read.csv("data/fullrep_MET_n1000.csv", stringsAsFactors = FALSE)
for (v in c("geno", "env", "loc", "year", "rep", "block", "row", "col")) {
df[[v]] <- factor(df[[v]])
}
df$yld <- as.numeric(df$yld)